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From Genetic Variants to Risk Prediction University of Tartu

Highlights
Tuition fee
750 EUR / full
750 EUR / full
Unknown
Tuition fee
750 EUR / full
750 EUR / full
Unknown
Duration
10 days
Duration
10 days
Apply date
Unknown
Apply date
Unknown
Start date
Unknown
Start date
Unknown
Campus location
Tartu, Estonia
Campus location
Tartu, Estonia
Taught in
English
Taught in
English

About

This hands-on summer course introduces modern genomic data analysis and is organised within the framework of the Horizon Europe TeamPerMed – Centre for Data-Enriched Medicine (project 101060011).

Overview

On-site in Tartu, 27 July - 7 August 2026

This hands-on summer course introduces modern genomic data analysis and is organised within the framework of the Horizon Europe TeamPerMed – Centre for Data-Enriched Medicine (project 101060011). It directly supports TeamPerMed WP2 and WP4 by building capacity in genomic risk prediction methods (GWAS, PRS) and reproducible analysis pipelines that underpin our pilot studies and future clinical decision support tools. Starting from raw genotype-phenotype datasets, we will explore how to clean, visualise, and interpret complex biological patterns. Along the way, students will learn practical skills that underpin today’s genetic research, including running exploratory analyses (EDA), applying quality control (QC), uncovering population structure, and conducting basic genome-wide association studies (GWAS).

Students will work in groups and learn to interpret findings from a biological perspective, understanding how ancestry influences the signals we detect. Students will build confidence in core computational methods, such as dimensionality reduction, clustering, and polygenic risk scoring, while maintaining a focus on clarity and reproducibility.

Accreditation

Every seven years, all Estonian higher education institutions must undergo external evaluation – institutional accreditation. The latest assessment took place in 2022. The assessment council of the Estonian Quality Agency for Education decided to accredit the University of Tartu for the next seven years (2023-2029).

Programme Structure

Day 1: Monday, 27 July

Introduction to Gen. Epi., SNPs, data formats

Day 2: Tuesday, 28 July

EDA, QC: missingness, MAF, HWE

Day 3: Wednesday, 29 July

PCA, UMAP, clustering, interpretation

Day 4: Thursday, 30 July

PCA, UMAP, clustering, interpretation

Day 5: Friday, 31 July

Small-scale GWAS; Manhattan and QQ plots

Saturday, 1 August: free daySunday, 2 August: free day

Day 6: Monday, 3 August

Small-scale GWAS; Manhattan and QQ plots

Day 7: Tuesday, 4 August

PRS basics, ethics and privacy

Day 8: Wednesday, 5 August

PRS and rare variants of high impact

Day 9: Thursday, 6 August

Context-specificity of PRS and interpretation

Day 10: Friday, 7 August

Integration of all course skills

Audience

master's, PhD students

Lecturers

Linda RepettoResearch Fellow of Population Genetics at the University of Tartu Institute of GenomicsElia TisoJunior Research Fellow of Population Genetics at the University of Tartu Institute of GenomicsKristi LällResearch Fellow of Statistical Genetics at the University of Tartu Institute of GenomicsGuest Lecturers: TBA

Key information

Duration

  • Full-time
    • 10 days

Start dates & application deadlines

More details

Apply by 26 March 2026 to get the Early Bird discount!

Language

English

Credits

3 ECTS

Delivered

On Campus

Campus Location

  • Tartu, Estonia

What students do after studying

Join for free or log in to access our complete career info list.

Academic requirements

We are not aware of any specific GRE, GMAT or GPA grading score requirements for this programme.

English requirements

We are not aware of any English requirements for this programme.

Other requirements

General requirements

Entry requirements:

  • Online application form (application period March 20- April 20 2026)
  • Motivation letter (up to 1 page) that demonstrates the applicant’s motivation to participate, his/her expectations about the programme, how participation in the summer programme relates to his/her studies and interests, and how the applicant plans to use the gained experience and knowledge in the future.
  • Transcript of academic records
  • Application fee of 25 EUR
  • Copy of passport

PS: Only complete applications including all annexes submitted by the deadline will be considered for selection.

Student Insurance via Studyportals Partner

Make sure to cover your health, travel, and stay while studying abroad. Even global coverages can miss important items like Additional medical costs, Repatriation, Liability etc. Make sure your student insurance covers your needs.

Studyportals partnered with Aon to provide you with the best affordable student insurance, for a carefree experience away from home.

Get your student insurance now

Starting from €0.53/day, free cancellation any time.

Remember, countries and universities may have specific insurance requirements. To learn more about how student insurance work at University of Tartu and/or in Estonia, please visit Student Insurance Portal.

Tuition Fees

Tuition fees are shown in and the most likely applicable fee is shown based on your nationality.
  • International

    Non-residents
    750 EUR / full
    750 EUR / full
  • EU/EEA

    EU/EEA Nationals
    750 EUR / full
    750 EUR / full

Living costs

Tartu

Estonia
300 - 600 EUR / month

The living costs include the total expenses per month, covering accommodation, public transportation, utilities (electricity, internet), books and groceries.

Funding

1. Estonian National Scholarships at  StudyinEstonia.ee. 

You can read more about the scholarships on the homepage of StudyinEstonia.ee.

2. ENLIGHT scholarship 

More information and the application form are on the ENLIGHT scholarship page: https://ut.ee/en/content/enlight-scholarship 

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